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Published as a conference paper at NeurIPS 2026

Periodic Complex Stochastic Processes for Retrieving Atomic Structures of Unknown Matters

Gyoung S. Na, Chanyoung Park

Abstract

Retrieving unknown atomic structures from observable analytical spectra or images remains a long-standing challenge across natural sciences. However, retrieval accuracy of existing retrieval methods on analytical data remains suboptimal because they have overlooked the underlying periodic quantum mechanical perturbations of non-equilibrium atomic structures behind analytical data. This paper proposes a periodic complex stochastic process (PCSP) that models such periodic perturbations and establishes theoretical backgrounds of periodic stochastic process in the complex-valued domain, including its sample diversity, process length, and periodicity. Finally, we develop a complex-valued cross-modal retrieval (CVCR) by integrating PCSP with cross-modal retrieval frameworks. CVCR outperformed existing cross-modal retrieval methods in cross-modal retrieval tasks of real-world analytical chemistry. Moreover, CVCR achieved state-of-the-art retrieval accuracy in zero-shot settings on 40 million of molecules.

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